Derive meaningful biological insights

Custom Apps

Host Interactive Apps & Dashboards on Latch; RShiny, Ploty Dash, and most other frameworks are supported

Jupyter Labs

Create scalable cloud compute pods preinstalled with a Jupyter Labs environment

RStudio

Create scalable cloud compute pods preinstalled with an RStudio environment

IGV: Integrative Genomics Viewer

Visualize your alignment and genome files on Latch with a single click

Plotting

Create interactive Volcano, Bar, PCA, Scatter, and Heat Map plots

TSNE & UMAP

Perform dimensionality reduction on single cell count data using Serat or Scanpy

SRA/GEO Data Import

Import read files and study metadata from the Gene Expression Omnibus (GEO) or NCBI Sequence Read Archive (SRA) right into your Latch Workspace

Cloud Storage Bucket Mount

Mount any AWS S3 Bucket onto your workspace and interact with files as if they were uploaded directly

BaseSpace Import

Connect your Illumina BaseSpace account and manually or automatically import your Runs & Projects

FTP Data Import

Import data stored on an FTP sever directly into your workspace

Benchling Data Sync

Connect your Benchling account and import your schemas, entities and inventory data

Excel & Google Sheets

Import your Excel, Google Sheets and other tabular data into a tabular registry

AlphaFold2 & ColabFold

Easily run batches of Alphafold or ColabFold2 to predict protein structures from amino-acid sequences

DESeq2

Use a verified DESeq2 workflow to run differential expression analysis and interpret the results in an interactive report

MAGeCK

Run end-to-end MAGeCK through a UI to identify important genes in CRISPR-Cas9 knockout screens

Seurat & Scanpy

Interpret your single cell data using Seurat or Scanpy; perform clustering, dimensionality reduction, and differential expression analysis

RFDiffusion

Spin up a preconfigured compute environment to run RFDiffusion for generative protein design

DNAChisel

Access DNAChisel to optimize DNA sequences using custom or pre-configured settings

Sequence Alignment

Conduct pairwise or multiple sequence alignment to identify similarities and evolutionary relationships

Differential Expression Analyses

Use a verified Deseq2 workflow to run DE analysis and interpret the results in an interactive report

Pathway Analyses

Run GSEA and find top 20 pathways using mSigDB, KEGG, and GO pathway databases

Clinical Data Analysis

Analyze clinical data and electronic health records to support healthcare decisions

De Novo Assembly

Construct a genome sequence from scratch using overlapping DNA sequencing reads

Variant Calling

Detect genetic differences by comparing sequencing data to a reference genome

Multi-omics

Access an array of tools and pipelines integrate and analyze multiple types of -omics data for powerful discoveries

High-Content Imaging

Connect imaging instruments and high-content microscopy data natively

Cell-Based Assays

Access software tools to do ELISA, Flow Cytometry & Mass Spectometry

Spatial Biology

Perform pre-processing, analysis and interpretation of spatial data

Next Generation Sequencing (NGS)

Access an array of tools to ingest and process all of your NGS data; analyze DNA, RNA, and amino acid sequences

IND-Enabling Studies

Gain end-to-end provancance to validate the safety and efficacy of your drug candidate

Bulk RNA-Seq Analysis

Analyize RNA Sequencing data; run alignment, differential expression, pathway enrichment through a Latch Verified Workflow

Flow Cytometry

Use Flow Cytometry software tooling set to analyze and gate cells for diverse biological insights

Protein Structure Prediction

Run AlphaFold2, ColabFold, RFdiffusion, and RoseTTAFold at scale, predict protein structures from amino-acid sequences, visualize PDBs, and access on-demand GPU computation