Bulk RNA-sequencing

Store and share unlimited RNA-seq data files

Scientists should no longer have to send zipped folder of raw data over email, or take static screen captures to share a result. Latch Data puts all files and folders in a single place, so everyone can store, collaborate, and see analyses results in real time.

Bring your data from anywhere, including:

Once on the platform all the data is easily accessible to each team member to QC, organize, and explore.

Process Raw Data into Counts Within Hours, and Avoid Weeks of CRO Turnaround

The Latch Verified Bulk RNA-seq workflow allows your team easily to perform QC, trimming, alignment, and gene count quantification.

The workflow can be used out of the box or modified by editing the underlying code to swap out parameters or steps. Workflows for other assays (e.g. ATAC-seq, CHIP-seq) can be easily developed by your team.

Understand differentially expressed genes with Volcano Plots, Heatmaps, MA Plots

Run DeSeq2 to identify transcriptionally distinct features between biological samples. Explore downstream visualizations in your browser, with the flexibility to alter and customize results.

Use fold change measurements to interactively identify deferentially-expressed genes of interest (GOI) between conditions. Flexibly select gene panels for publication-ready heat map visualizations.

Discover gene signatures across public gene set and pathway databases

Perform gene set enrichment analyses against multiple public gene set and pathway databases. Dynamically adjust the number of top pathways you want display and drill down to most relevant gene sets and pathways of interest.

Perform additional analysis on counts in a flexible notebook environment

Anyone with R or Python fluency can flexibly explore counts. csv files using custom code, or a pre-existing packages in a browser-based notebook.