In the past decade alone, over 20 companies and 50 products have emerged for targeted and unbiased transcriptome and proteome profiling.

Our landscape helps audiences navigate this space by offering a clear view of these innovations, highlighting key differences and important dimensions to consider when comparing products between companies.

Spatial Product Database

Imaging-based
Sequencing-based
CyToF
DNA pixelation
In situ sequencing
Matrix Assisted Laser Desorption / Ionization (MALDI)
mIF
Multiplex FISH
Multiplexed Ion Beam Imaging
Multispectral Imaging (MSI)
Photo-activated barcoding
seqIF
Sequencing-based
Solid-phase capture
Cultured cells
Fixed frozen
Formalin-fixed paraffin-embedded (FFPE)
Fresh frozen
Frozen cells
Organoids
PFA fixed cells in solution
Tissue microarrays (TMAs)
No
Yes
Any species
Human
Insect
Marine
Mouse
Non-human primate
Plant
Rabbit
Rat
Chromatin
Epigenetics
Genomic loci
Glycans
Lipids
miRNA
Other macromolecules
Protein
RNA
rRNA
Small molecules
Precision Insight with Pre-defined Panels
Unbiased Profiling
10X Genomics
10X Genomics logo

Sequencing

Visium Spatial Gene Expression

10X Genomics

10X Genomics
10X Genomics logo

Sequencing

Visium Spatial Gene Expression for FFPE

10X Genomics

10X Genomics
10X Genomics logo

Sequencing

Visium HD Spatial Gene Expression

10X Genomics

10X Genomics
10X Genomics logo

Sequencing

CytAssist Spatial Gene and Protein Expression

10X Genomics

10X Genomics
10X Genomics logo

Imaging

Xenium In Situ Platform

10X Genomics

Acuity Spatial (part of Bruker)
Acuity Spatial (part of Bruker) logo

Imaging

jebFISH™

Acuity Spatial (part of Bruker)

Akoya Biosciences
Akoya Biosciences logo

Imaging

Phenocycler-Fusion

Akoya Biosciences

Akoya Biosciences
Akoya Biosciences logo

Imaging

Phenoimager

Akoya Biosciences

Alpenglow
Alpenglow logo

Imaging

Aurora 3D Spatial Biology Solution

Alpenglow

AtlasXOmics
AtlasXOmics logo

Sequencing

DBiT-seq

AtlasXOmics

AtlasXOmics
AtlasXOmics logo

Sequencing

FlowGel

AtlasXOmics

Bio-Techne
Bio-Techne logo

Imaging

RNAscope

Bio-Techne

Bruker
Bruker logo

Imaging

MALDI HiPLEX-IHC

Bruker

Canopy
Canopy logo

Imaging

CellScape

Canopy

Complete Genomics STOmics
Complete Genomics STOmics logo

Sequencing

Stereo-seq OMNI

Complete Genomics STOmics

Complete Genomics STOmics
Complete Genomics STOmics logo

Sequencing

Stereo-seq Transcriptomics

Complete Genomics STOmics

Complete Genomics STOmics
Complete Genomics STOmics logo

Sequencing

Transcriptomics mIF

Complete Genomics STOmics

Complete Genomics STOmics
Complete Genomics STOmics logo

Sequencing

Stereo-CITE Proteo-Transcriptomics

Complete Genomics STOmics

Curio Biosciences
Curio Biosciences logo

Sequencing

CurioSeeker

Curio Biosciences

Curio Biosciences
Curio Biosciences logo

Sequencing

CurioTrekker

Curio Biosciences

DigitBio
DigitBio logo

Sequencing

Light-seq

DigitBio

Ionpath
Ionpath logo

Imaging

MIBIscope

Ionpath

Leica Microsystems
Leica Microsystems logo

Imaging

Leica BOND RX

Leica Microsystems

Leica Microsystems
Leica Microsystems logo

Imaging

SpectraPlex for STELLARIS

Leica Microsystems

Leica Microsystems
Leica Microsystems logo

Imaging

Cell DIVE

Leica Microsystems

Lunaphore
Lunaphore logo

Imaging

COMET

Lunaphore

Miltenyi Biotec
Miltenyi Biotec logo

Imaging

MACSima

Miltenyi Biotec

NanoString
NanoString logo

Imaging

CosMx

NanoString

NanoString
NanoString logo

Sequencing

GeoMx

NanoString

NanoString
NanoString logo

Imaging

nCounter

NanoString

Pixelgen
Pixelgen logo

Sequencing

MPX

Pixelgen

RareCyte
RareCyte logo

Imaging

Orion™

RareCyte

RebusBio
RebusBio logo

Imaging

Rebus Esper™

RebusBio

Resolve Biosciences
Resolve Biosciences logo

Imaging

Molecular Cartography

Resolve Biosciences

Single Technologies
Single Technologies logo

Sequencing

3-D Sequencing™

Single Technologies

Singular Genomics
Singular Genomics logo

Sequencing

G4X™ Spatial Sequencer

Singular Genomics

Spatial Genomics
Spatial Genomics logo

Imaging

GenePS

Spatial Genomics

Standard BioTools Inc.
Standard BioTools Inc. logo

Imaging

Hyperion™ Imaging Systems

Standard BioTools Inc.

Stellaromics
Stellaromics logo

Imaging

Pyxa In Situ Analyzer

Stellaromics

Syncell
Syncell logo

Imaging

Microscoop® Mint

Syncell

Ultivue (merged with Vizgen)
Ultivue (merged with Vizgen) logo

Imaging

InSituPlex®

Ultivue (merged with Vizgen)

Vizgen
Vizgen logo

Imaging

MERFISH Ultra

Vizgen